mirror of https://github.com/jlizier/jidt
93 lines
3.2 KiB
Matlab
Executable File
93 lines
3.2 KiB
Matlab
Executable File
%%
|
|
%% Java Information Dynamics Toolkit (JIDT)
|
|
%% Copyright (C) 2012, Joseph T. Lizier
|
|
%%
|
|
%% This program is free software: you can redistribute it and/or modify
|
|
%% it under the terms of the GNU General Public License as published by
|
|
%% the Free Software Foundation, either version 3 of the License, or
|
|
%% (at your option) any later version.
|
|
%%
|
|
%% This program is distributed in the hope that it will be useful,
|
|
%% but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
%% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
%% GNU General Public License for more details.
|
|
%%
|
|
%% You should have received a copy of the GNU General Public License
|
|
%% along with this program. If not, see <http://www.gnu.org/licenses/>.
|
|
%%
|
|
|
|
% function plotRawCa(states, saveIt)
|
|
%
|
|
% Plot the given raw values of a cellular automata run
|
|
%
|
|
% Inputs
|
|
% - states - 2D array of states of the CA (1st index time goes along the rows, 2nd index cells go across the columns)
|
|
% - rule - Rule number (as number or a string) for the rule, used to label the file
|
|
% - plotOptions - structure (optional) containing the following variables:
|
|
% - plotRows - how many rows to plot (default is all)
|
|
% - plotCols - how many columns to plot (default is all)
|
|
% - plotStartRow - which row to start plotting from (default is 1)
|
|
% - plotStartCol - which column to start plotting from (default is 1)
|
|
% - saveIt - whether to save a file of the image (default false)
|
|
% - saveFormat - what file format to save the image in - 'eps' or 'pdf' (default 'eps')
|
|
|
|
function plotRawCa(states, rule, plotOptions, saveIt, saveFormat)
|
|
|
|
if (nargin < 3)
|
|
plotOptions = {};
|
|
end
|
|
if not(isfield(plotOptions, 'plotRows'))
|
|
plotOptions.plotRows = size(states, 1);
|
|
end
|
|
if not(isfield(plotOptions, 'plotCols'))
|
|
plotOptions.plotCols = columns(states);
|
|
end
|
|
if not(isfield(plotOptions, 'plotStartRow'))
|
|
plotOptions.plotStartRow = 1;
|
|
end
|
|
if not(isfield(plotOptions, 'plotStartCol'))
|
|
plotOptions.plotStartCol = 1;
|
|
end
|
|
if (plotOptions.plotRows > 1000)
|
|
fprintf('*** Limiting number of plotted rows to 1000\n');
|
|
plotOptions.plotRows = 1000;
|
|
end
|
|
if (plotOptions.plotCols > 1000)
|
|
fprintf('*** Limiting number of plotted columns to 1000\n');
|
|
plotOptions.plotCols = 1000;
|
|
end
|
|
if (nargin < 4)
|
|
saveIt = false;
|
|
end
|
|
if (nargin < 5)
|
|
saveFormat = 'eps';
|
|
end
|
|
|
|
figure(1);
|
|
% set the colormap for black = 1, white = 0
|
|
colormap(1 - gray(2))
|
|
imagesc(states(plotOptions.plotStartRow:plotOptions.plotStartRow+plotOptions.plotRows - 1, ...
|
|
plotOptions.plotStartCol:plotOptions.plotStartCol+plotOptions.plotCols - 1))
|
|
axis([0.5 (plotOptions.plotCols+0.5) 0.5 (plotOptions.plotRows+0.5)]);
|
|
colorbar
|
|
fprintf('Adding colorbar to ensure that the size of the diagram matches that of local info plots\n');
|
|
if (saveIt)
|
|
if (strcmp(saveFormat, 'eps'))
|
|
printDriver = 'epsc'; % to force colour
|
|
fontSize = 32;
|
|
else
|
|
printDriver = saveFormat;
|
|
fontSize = 13;
|
|
end
|
|
set(gca, 'fontsize', fontSize);
|
|
colorbar('fontsize', fontSize);
|
|
if (ischar(rule))
|
|
filename = sprintf('figures/%s-raw.%s', rule, saveFormat);
|
|
else
|
|
filename = sprintf('figures/%d-raw.%s', rule, saveFormat);
|
|
end
|
|
print(filename, sprintf('-d%s', printDriver));
|
|
end
|
|
end
|
|
|