jidt/java/source/infodynamics/measures/continuous/kernel
Joseph Lizier b02760ddd3 Adding overloads on setObservations and addObservations for MI and TE calculators to handle one variable univariate and one variable multivariate 2021-11-15 10:58:59 +11:00
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ActiveInfoStorageCalculatorKernel.java Minor changes to Javadocs for AIS kernel 2018-05-16 22:28:19 +10:00
ActiveInfoStorageCalculatorMultiVariateKernel.java Altering AIS Multivariate Via Mutual Info calculator -- and child classes, now including kernel estimator -- to support auto-embedding primarily via the parent methods of the univariate AIS calculator. 2018-05-16 22:42:32 +10:00
EntropyCalculatorKernel.java Adding computeLocalOfPreviousObservations() to continuous Entropy estimator interface and all underlying implementations. Added unit tests that locals should average back ok. Also fixing multivariate Entropy estimator interface to implement the univariate interface also (and fixing underlying implementations to comply) 2018-04-27 11:20:25 +10:00
EntropyCalculatorMultiVariateKernel.java Adding computeLocalOfPreviousObservations() to continuous Entropy estimator interface and all underlying implementations. Added unit tests that locals should average back ok. Also fixing multivariate Entropy estimator interface to implement the univariate interface also (and fixing underlying implementations to comply) 2018-04-27 11:20:25 +10:00
KernelCount.java Javadocs made release-ready in the continuous.kernel package. Also renamed any "epsilon" variables to "kernelWidth" in most classes. 2014-08-13 02:30:39 +00:00
KernelEstimatorMultiVariate.java Corrects the access at one point to the bins for the data points in the multivariate kernel estimator, which should use an IntArray object but did use an int[] object to access . Fixes #69. 2018-05-10 20:20:02 +10:00
KernelEstimatorTransferEntropy.java Javadocs made release-ready in the continuous.kernel package. Also renamed any "epsilon" variables to "kernelWidth" in most classes. 2014-08-13 02:30:39 +00:00
KernelEstimatorTransferEntropyMultiVariate.java Javadocs made release-ready in the continuous.kernel package. Also renamed any "epsilon" variables to "kernelWidth" in most classes. 2014-08-13 02:30:39 +00:00
KernelEstimatorUniVariate.java Altering kernel estimator classes so that the return values for getProbability are proper probability densities rather than probabilities (by now dividing by the kernel diameter/volume). This patches the EntropyCalculatorKernel and the EntropyCalculatorMultiVariateKernel to properly return differential entropy, as advertised. Makes no difference to the MI and TE kernel calculators, as they use counts anyway rather than probability densities. 2016-10-18 11:56:38 +11:00
MultiInfoCalculatorKernel.java Making continuous MultiInfoCalculator classes implement the InfoMeasureCalculatorContinuous interface. For the interfaces, this means removing methods where duplicated. For implementing classes, this means adding the missing methods. 2017-08-18 23:42:43 +10:00
MutualInfoCalculatorMultiVariateKernel.java Adding NORMALISE and NOISE_LEVEL_TO_ADD properties to all mutual information calculators for continuous-valued data (extends this capability from only KSG to Gaussian and kernel as well, the latter already had NORMALISE) 2019-04-02 12:38:17 +11:00
PredictiveInfoCalculatorKernel.java Fixes issue 34 -- adds predictive information calculators for continuous variables; interface definition, common code via abstract mutual information calculator, and implementations for Gaussian, kernel and KSG estimators. 2014-10-16 00:31:41 +00:00
TransferEntropyCalculatorKernel.java Minor fixes to default values of TE calculator properties, and adding error messages for array file reading 2015-07-09 14:38:23 +00:00
TransferEntropyCalculatorKernelPlain.java Adding getProperty() method to all conditional MI calculators and TE calculators (except for multivariate versions at this stage), in readiness for automated embedding being added to TE Kraskov to partially fix Issue 38 2015-06-04 04:27:23 +00:00
TransferEntropyCalculatorKernelPlainIterators.java Adding getProperty() method to all conditional MI calculators and TE calculators (except for multivariate versions at this stage), in readiness for automated embedding being added to TE Kraskov to partially fix Issue 38 2015-06-04 04:27:23 +00:00
TransferEntropyCalculatorKernelSeparate.java Adding getProperty() method to all conditional MI calculators and TE calculators (except for multivariate versions at this stage), in readiness for automated embedding being added to TE Kraskov to partially fix Issue 38 2015-06-04 04:27:23 +00:00
TransferEntropyCalculatorMultiVariateKernel.java Adding overloads on setObservations and addObservations for MI and TE calculators to handle one variable univariate and one variable multivariate 2021-11-15 10:58:59 +11:00
TransferEntropyCalculatorMultiVariateSingleObservationsKernel.java Javadocs made release-ready in the continuous.kernel package. Also renamed any "epsilon" variables to "kernelWidth" in most classes. 2014-08-13 02:30:39 +00:00
TransferEntropyKernelCounts.java Javadocs made release-ready in the continuous.kernel package. Also renamed any "epsilon" variables to "kernelWidth" in most classes. 2014-08-13 02:30:39 +00:00
package-info.java Adding package-info.java files for Javadocs for the various packages 2014-08-13 15:36:10 +00:00