jidt/java/source/infodynamics/measures/continuous/kernel
joseph.lizier ab21895321 Correcting TE Kernel estimator's bias correction method to match Schreiber's approach to including contributions from other correlation sums when the full joint space has no neighbours. 2014-08-05 02:04:56 +00:00
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ActiveInfoStorageCalculatorKernel.java Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
EntropyCalculatorKernel.java Refactored KernelEstimatorSingleVariate to be called UniVariate 2012-10-25 01:25:10 +00:00
EntropyCalculatorMultiVariateKernel.java Code edits to mixed calculators to fix compilation after moving them into the "mixed" package. Also needed to make some alternations to some of the continuous calculators to fix usage of protected members which are no longer accessible to the moved classes. 2014-04-17 11:10:58 +00:00
KernelCount.java Uploading whole of Java Information Dynamics toolkit for the first time. 2012-05-08 00:18:37 +00:00
KernelEstimatorMultiVariate.java Code edits to mixed calculators to fix compilation after moving them into the "mixed" package. Also needed to make some alternations to some of the continuous calculators to fix usage of protected members which are no longer accessible to the moved classes. 2014-04-17 11:10:58 +00:00
KernelEstimatorTransferEntropy.java Altered interal names of kernel width variables to be kernel width, instead of epsilon. This is more intuitive for users. 2012-08-07 07:49:23 +00:00
KernelEstimatorTransferEntropyMultiVariate.java Adding various comments 2012-12-13 14:42:40 +00:00
KernelEstimatorUniVariate.java Correcting TE Kernel estimator's bias correction method to match Schreiber's approach to including contributions from other correlation sums when the full joint space has no neighbours. 2014-08-05 02:04:56 +00:00
MultiInfoCalculatorKernel.java Refactored KernelEstimatorSingleVariate to be called UniVariate 2012-10-25 01:25:10 +00:00
MutualInfoCalculatorMultiVariateKernel.java Moved Kraskov mutual info calculator multivariate to inherit from the common MI multivariate class, so as to share code for adding observations, statistical tests, etc. Passed unit testing. 2014-03-26 05:08:46 +00:00
TransferEntropyCalculatorKernel.java Correcting TE Kernel estimator's bias correction method to match Schreiber's approach to including contributions from other correlation sums when the full joint space has no neighbours. 2014-08-05 02:04:56 +00:00
TransferEntropyCalculatorKernelPlain.java Added classes for joint entropy and multivariate mutual information calculation with gaussian assumption. 2012-08-01 07:26:18 +00:00
TransferEntropyCalculatorKernelPlainIterators.java Added classes for joint entropy and multivariate mutual information calculation with gaussian assumption. 2012-08-01 07:26:18 +00:00
TransferEntropyCalculatorKernelSeparate.java Added new method generateRandomPerturbations(int, int) to RandomGenerator, and switched all computeSignificance methods to use this (since there's no need for checking for distinct perturbations really, and this is much faster). Required adding sortIndices(double[]) method to MatrixUtils 2013-10-18 00:42:12 +00:00
TransferEntropyCalculatorMultiVariateKernel.java Added interface for ConditionalTransferEntropy. Added abstract implementation ConditionalTransferEntropyCalculatorViaCondMutualInfo, and child classes for Kraskov and Gaussian implementations. 2014-04-17 05:58:13 +00:00
TransferEntropyCalculatorMultiVariateSingleObservationsKernel.java Adding various comments 2012-12-13 14:42:40 +00:00
TransferEntropyKernelCounts.java Uploading whole of Java Information Dynamics toolkit for the first time. 2012-05-08 00:18:37 +00:00