jidt/java/source/infodynamics/measures/continuous
joseph.lizier 24a0566fd4 Patching bug in digamma function which is susceptible to race condition in multi-threaded applications. Also explicitly setting return array values in Kraskov calculators. 2014-11-14 10:24:53 +00:00
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gaussian Fixes issue 34 -- adds predictive information calculators for continuous variables; interface definition, common code via abstract mutual information calculator, and implementations for Gaussian, kernel and KSG estimators. 2014-10-16 00:31:41 +00:00
kernel Additional operations added to multi-info interface for continuous data, and pulled common operations into a common class (revamped Kernel calculator rewritten to use this) 2014-10-30 04:18:04 +00:00
kozachenko Adding package-info.java files for Javadocs for the various packages 2014-08-13 15:36:10 +00:00
kraskov Patching bug in digamma function which is susceptible to race condition in multi-threaded applications. Also explicitly setting return array values in Kraskov calculators. 2014-11-14 10:24:53 +00:00
symbolic Appending suffix "Discrete" to all discrete calculators. Step 2 -- refactoring java files, which has flow on effects to other java files. All fixed here. 2014-08-14 03:00:15 +00:00
ActiveInfoStorageCalculator.java Minor updates to javadocs regarding Active Info Storage Calculators. 2014-09-16 03:27:28 +00:00
ActiveInfoStorageCalculatorViaMutualInfo.java Minor updates to javadocs regarding Active Info Storage Calculators. 2014-09-16 03:27:28 +00:00
ChannelCalculator.java Minor corrections to Javadocs for the continuous package 2014-08-13 15:20:00 +00:00
ChannelCalculatorCommon.java Minor corrections to Javadocs for the continuous package 2014-08-13 15:20:00 +00:00
ChannelCalculatorMultiVariate.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
ConditionalMutualInfoCalculatorMultiVariate.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
ConditionalMutualInfoMultiVariateCommon.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
ConditionalTransferEntropyCalculator.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
ConditionalTransferEntropyCalculatorViaCondMutualInfo.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
EntropyCalculator.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
EntropyCalculatorMultiVariate.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
MultiInfoCalculator.java Additional operations added to multi-info interface for continuous data, and pulled common operations into a common class (revamped Kernel calculator rewritten to use this) 2014-10-30 04:18:04 +00:00
MultiInfoCalculatorCommon.java Additional operations added to multi-info interface for continuous data, and pulled common operations into a common class (revamped Kernel calculator rewritten to use this) 2014-10-30 04:18:04 +00:00
MutualInfoCalculatorMultiVariate.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
MutualInfoMultiVariateCommon.java Adding fast nearest neighbour searcher for univariate data (uses only a sorted array rather than whole k-d tree). Adds an abstract nearest neighbour searcher so calling classes don't necessarily need to know whether they're dealing with uni or multi-variates. MI and conditional MI Kraskov altered to use this where possible. 2014-10-30 04:04:16 +00:00
PredictiveInfoCalculator.java Fixes issue 34 -- adds predictive information calculators for continuous variables; interface definition, common code via abstract mutual information calculator, and implementations for Gaussian, kernel and KSG estimators. 2014-10-16 00:31:41 +00:00
PredictiveInfoCalculatorViaMutualInfo.java Fixes issue 34 -- adds predictive information calculators for continuous variables; interface definition, common code via abstract mutual information calculator, and implementations for Gaussian, kernel and KSG estimators. 2014-10-16 00:31:41 +00:00
TransferEntropyCalculator.java Minor corrections to Javadocs for the continuous package 2014-08-13 15:20:00 +00:00
TransferEntropyCalculatorMultiVariate.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
TransferEntropyCalculatorMultiVariateViaCondMutualInfo.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
TransferEntropyCalculatorViaCondMutualInfo.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
TransferEntropyCommon.java Javadocs made release-ready in the continuous package. Also added computeLocalUsingPreviousObservations into ChannelCalculator and ChannelCalculatorMultiVariate (removed from MutualInfoMultivarate), and made the ViaCondMutualInfo classes not be abstract anymore, and moved embedding properties up into the main TransferEntropyCalculator interface 2014-08-13 02:18:33 +00:00
package-info.java Tweaks to javadocs 2014-08-14 06:26:06 +00:00