jidt/java/source/infodynamics/measures/continuous
joseph.lizier 2571c3ae9e Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
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gaussian Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
kernel Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
kozachenko Uploaded ConditionalMutualInformationCalculator after fixing the computeSignificance function. (untested so far however) 2012-10-30 06:14:44 +00:00
kraskov Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
symbolic Addressing minor compile warning 2012-10-25 01:30:47 +00:00
ActiveInfoStorageCalculator.java Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
ChannelCalculator.java Updating javadoc comments in the code, a. to make them more explicit regarding the transfer entropy calculators, and specifically b. to show that addObservations does not append observation time series. 2012-08-08 05:33:13 +00:00
ChannelCalculatorCommon.java Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
ChannelCalculatorMultiVariate.java Patched covariance calculation, added utils, patched analytic computation of distribution of MI with linear Gaussians, altered comments 2013-01-08 05:37:48 +00:00
ConditionalMutualInfoCalculatorMultiVariate.java Adding interface for conditional mutual information (continuous) calculator, common methods for it, and implementation for Gaussian variables. 2013-01-12 13:43:43 +00:00
ConditionalMutualInfoCalculatorMultiVariateWithDiscrete.java Added classes for joint entropy and multivariate mutual information calculation with gaussian assumption. 2012-08-01 07:26:18 +00:00
ConditionalMutualInfoCalculatorMultiVariateWithDiscreteSource.java Reconditioned Conditional MI with Discrete calculator Kraskov as a child class of Conditional MI with Discrete calculator Common 2013-03-18 05:49:00 +00:00
ConditionalMutualInfoCalculatorMultiVariateWithDiscreteSourceCommon.java Added new method generateRandomPerturbations(int, int) to RandomGenerator, and switched all computeSignificance methods to use this (since there's no need for checking for distinct perturbations really, and this is much faster). Required adding sortIndices(double[]) method to MatrixUtils 2013-10-18 00:42:12 +00:00
ConditionalMutualInfoMultiVariateCommon.java Added new method generateRandomPerturbations(int, int) to RandomGenerator, and switched all computeSignificance methods to use this (since there's no need for checking for distinct perturbations really, and this is much faster). Required adding sortIndices(double[]) method to MatrixUtils 2013-10-18 00:42:12 +00:00
EntropyCalculator.java Uploading whole of Java Information Dynamics toolkit for the first time. 2012-05-08 00:18:37 +00:00
EntropyCalculatorMultiVariate.java Added determinant computation via Cholesky decomposition for symmetric matrices (more efficient) 2012-08-17 07:28:50 +00:00
MultiInfoCalculator.java Uploading whole of Java Information Dynamics toolkit for the first time. 2012-05-08 00:18:37 +00:00
MultiInfoCalculatorWithMarginals.java Uploading whole of Java Information Dynamics toolkit for the first time. 2012-05-08 00:18:37 +00:00
MutualInfoCalculatorMultiVariate.java Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
MutualInfoCalculatorMultiVariateWithDiscrete.java Made sure all discrete calculators use log_2 to make answers in bits (some were still using log of base). 2012-09-05 06:23:48 +00:00
MutualInfoCalculatorMultiVariateWithMarginals.java Uploading whole of Java Information Dynamics toolkit for the first time. 2012-05-08 00:18:37 +00:00
MutualInfoMultiVariateCommon.java Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00
TransferEntropyCalculator.java Updating javadoc comments in the code, a. to make them more explicit regarding the transfer entropy calculators, and specifically b. to show that addObservations does not append observation time series. 2012-08-08 05:33:13 +00:00
TransferEntropyCalculatorMultiVariate.java Updating javadoc comments in the code, a. to make them more explicit regarding the transfer entropy calculators, and specifically b. to show that addObservations does not append observation time series. 2012-08-08 05:33:13 +00:00
TransferEntropyCommon.java Rearchitected Active Info Storage calculators to use a common parent class for data collection, and underlying mutual information classes for the implementation specifics. Includes adding Kraskov and Gaussian Active Info Storage calculators, and implementing embedding delay for the past history. 2014-03-26 04:05:20 +00:00