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33 Commits

Author SHA1 Message Date
David Shorten bcefd900c4 moved the location of the Python testing script 2022-08-04 16:06:25 +09:30
David Shorten a398c925a8 added python for spiking network inference 2022-08-04 16:03:12 +09:30
jlizier 3c24debea5 Updating PDFs of wiki pages of all demos to make sure they are up to date; includes adding the new wiki page for GPU 2018-11-25 21:47:41 +11:00
jlizier 093737951f Updating checking of expected jar location in all python demo scripts, mirroring what was done on previous commit for example1 script 2018-06-28 00:04:08 +10:00
jlizier a278060056 Adding error check on python demo 1 that script is called from correct demos/python directory 2018-06-27 20:49:32 +10:00
jlizier aedefd07bc Fixed analytic expressions for transfer entropies in the simple demos for coupled Gaussians (should have computed directly from the empirical correlations all along, but didn't notice because errors were very small) 2017-05-22 15:53:42 +10:00
jlizier f840f0ec72 Added statistical significance test (and analytic option where available) to the AutoAnalyser demo. Required also updating how python generated code handles input data, and updating readIntsFile and readFlotsFile utilities, so AutoAnalyser worked with Python3. Also updated the GUI of AutoAnalyser to have a little more room for status messages (required for statistical significance. 2017-04-10 20:29:00 +10:00
jlizier 8fd1e6ad2f Updated extraction of local TE values in ensemble method in Python demo 7 to use the new getSeparateNumObservations() method on the TE calculator 2017-03-16 10:49:01 +11:00
jlizier fbe95040f6 Updating PDFs of all demos before making new release 2016-10-21 00:13:26 +11:00
jlizier bea2c77aa3 Added python examples 7 (ensemble method with TE Kraskov) and 9 (TE Kraskov with auto-embedding Ragwitz) 2016-10-20 10:20:20 +11:00
jlizier 2d4e30aeb4 Minor bug patch for readFloatsFile for python demos 2016-10-18 15:09:59 +11:00
jlizier d74749f17d Showing how to use numpy arrays of ints with JIDT in python 3 with jpype1 in python demo 1 2016-10-18 15:08:15 +11:00
jlizier 0386991f00 Altering use of class methods for python demo 6 (I think this was required for python 3 compliance?) 2016-10-18 15:07:15 +11:00
joseph.lizier 3f3c737ddd Updating PDFs of Demos for next release. Also updated Schreiber TE demo to add section about auto-embedding. And updated release notes and svn number in build file. 2015-07-07 14:51:04 +00:00
joseph.lizier 192ad12bb2 Updating python code to be compatible with both python 2 and 3. (Includes changing xrange -> range, and removing ";", as found by Michael Wibral) 2015-06-10 11:37:15 +00:00
joseph.lizier 0f5bf692ac Adding PDFs of Wiki pages on using JIDT in non-Java environments, ready to be distributed. 2015-05-29 03:28:17 +00:00
joseph.lizier 379f4496f0 Adding Schreiber TE example for Python, with Kraskov estimator, mirroring the main demo here in Matlab/Octave 2015-02-03 11:13:56 +00:00
joseph.lizier 9c37420d69 Updated build.xml, readme and demo PDFs for new version release 1.2 2015-01-28 05:44:59 +00:00
joseph.lizier 413691bd4e Adding univariate MI calculation to example 6 for Python 2015-01-23 03:39:42 +00:00
joseph.lizier 2a36ac0387 Updating PDFs of demos and paper, release notes and release numbering ready for v1.1 release. 2014-11-13 23:35:47 +00:00
joseph.lizier 643d76fe19 Adding R example 5 and 6, adding notices to jar dist, finalising python example 6 using file reading utilities; adding extra printout to Example 4 in Java 2014-08-22 05:01:12 +00:00
joseph.lizier 091d66a4f9 Appending suffix "Discrete" to all discrete calculators. Step 5 -- refactoring within demos, and updating PDFs for demos 2014-08-14 04:02:51 +00:00
joseph.lizier 8efe295a62 Adding readme files for all the demos for which we have not yet done so 2014-08-07 01:26:29 +00:00
joseph.lizier e6242a544c Adding GPLv3 license statement to all code headers in the demos; also adding readme for use of octave-java code; correcting references to papers from CA code 2014-08-06 06:52:59 +00:00
joseph.lizier d3bb73bba0 Refactoring non-Java demos for discrete TE calculator to take source as first argument before destination (to match continuous calculators) 2014-08-05 13:01:02 +00:00
joseph.lizier e44eba7199 Renaming (Apparent) TE discrete calculator to remove "Apparent" in all of the non-Java demo code 2014-08-05 05:19:21 +00:00
joseph.lizier f006c53e46 Adding python examples 5 and 6. Minor tweaks to octave examples 5 and 6 to clarify comments or minor conflicts. Error corrected in comment of python example 2 2013-06-07 05:58:47 +00:00
joseph.lizier 88b33308c6 Tweaked python example 2 to add minor comment 2013-06-05 05:39:39 +00:00
joseph.lizier 15647840f8 Tweaked python example 2 to keep print statement thin 2013-06-05 05:38:12 +00:00
joseph.lizier 7336780b2b Added python example 2. Patched octave example 2 comments and python example 1 comments 2013-06-05 05:33:49 +00:00
joseph.lizier c767ae929f Added python example 4 2013-06-04 02:00:52 +00:00
joseph.lizier d818db1351 Added python example 3; plotLocalInfoMeasureForCA now allows initial states to be provided. 2013-06-04 01:50:21 +00:00
joseph.lizier a06efba6e0 Added first python code example using JIDT 2013-01-14 12:49:16 +00:00