jlizier
|
3118e57384
|
Making conditional MI calculators (continuous) handle empty conditionals, and properly normalise new data according to the old (except for linear Gaussian calculator, which explicitly bars normalisation now).
|
2016-10-18 13:21:29 +11:00 |
|
joseph.lizier
|
733da8265d
|
Dynamic correlation exclusion, or Theiler window, added to all Kraskov estimators, i.e. Mutual Info, Conditional MI, Multi-info, and thereby the derived classes including transfer entropy. Fixes issue 35
|
2014-11-25 12:31:44 +00:00 |
|
joseph.lizier
|
24a0566fd4
|
Patching bug in digamma function which is susceptible to race condition in multi-threaded applications. Also explicitly setting return array values in Kraskov calculators.
|
2014-11-14 10:24:53 +00:00 |
|
joseph.lizier
|
ba537e948a
|
Enhancements to fast nearest neighbour searching for conditional mutual information; utilises points found matching the conditional search criteria in the joint conditional with var1 and var 2 searches.
|
2014-11-04 00:57:26 +00:00 |
|
joseph.lizier
|
57fafd1551
|
Adding more methods to nearest neighbour search classes to return collections of points within ranges via arrays, and to use additional criteria in searching or take arguments for one variable that has already been tested. Utilising these new searches within Conditional MI Kraskov estimator algorithm 1
|
2014-11-03 04:57:24 +00:00 |
|
joseph.lizier
|
6ade6d4311
|
Adding fast nearest neighbour searcher for univariate data (uses only a sorted array rather than whole k-d tree). Adds an abstract nearest neighbour searcher so calling classes don't necessarily need to know whether they're dealing with uni or multi-variates. MI and conditional MI Kraskov altered to use this where possible.
|
2014-10-30 04:04:16 +00:00 |
|
joseph.lizier
|
9c05f4693a
|
Fixes issue 32 -- adds fast neighbour search to Kraskov conditional MI calculators (and by implication to TE calculators). Requires adding a neighbour search within different radii for each variable to the k-d tree class.
|
2014-10-15 10:36:58 +00:00 |
|
joseph.lizier
|
70bcc7c922
|
Mirrors multi-threading from Kraskov MI calculators to Kraskov conditional MI calculators, and so fixes issue 29. Also adds some minor modifications to multithreading code for Kraskov MI calculators.
|
2014-09-16 01:36:39 +00:00 |
|
joseph.lizier
|
1ecdd8829f
|
Extra imports to fix Javadoc references
|
2014-08-13 03:48:54 +00:00 |
|
joseph.lizier
|
786784e83c
|
Javadocs made release-ready in the continuous.kraskov package.
|
2014-08-13 02:36:09 +00:00 |
|
joseph.lizier
|
6709163afd
|
Adding GPLv3 license statement to all code headers in the infodymamics.measures.continuous.kraskov, symbolic and discrete packages (continuing ...)
|
2014-08-06 05:43:16 +00:00 |
|
joseph.lizier
|
4bd22a0984
|
Reconditioned Conditional MI calculator Kraskov as a child class of Conditional MI calculator Common
|
2013-03-11 12:55:29 +00:00 |
|
joseph.lizier
|
6761de7e02
|
Added debug prints to Kraskov Conditional MI calculators
|
2013-01-15 01:14:13 +00:00 |
|
joseph.lizier
|
f466012556
|
Made Kraskov Conditional MI calculator implement the common Conditional MI interface
|
2013-01-14 12:51:34 +00:00 |
|
joseph.lizier
|
617880f9f5
|
Making Kraskov MI and higher order calculators use MAX_NORM in the marginal spaces by default (previously this had to be supplied via a property - it was the standard choice made, but was not the default). This aligns with the default specified in the Kraskov paper.
|
2012-12-20 10:38:03 +00:00 |
|
joseph.lizier
|
56d868ca00
|
Uploading whole of Java Information Dynamics toolkit for the first time.
|
2012-05-08 00:18:37 +00:00 |