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end Thurs

This commit is contained in:
David Shorten 2019-01-22 19:17:36 +11:00
parent 8bcf41e572
commit fcbf5e7dac
1 changed files with 3 additions and 3 deletions
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6
java/source/infodynamics/measures/spiking/integration/TransferEntropyCalculatorSpikingIntegration.java
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@ -28,7 +28,7 @@ import infodynamics.utils.UnivariateNearestNeighbourSearcher;
public class TransferEntropyCalculatorSpikingIntegration implements
TransferEntropyCalculatorSpiking {
protected final static boolean USE_POINT_ITSELF = false;
protected final static boolean USE_POINT_ITSELF = true;
protected final static boolean TRIM_RADII = false;
protected final static boolean USE_SAME_RADII = false;
@ -867,8 +867,8 @@ public class TransferEntropyCalculatorSpikingIntegration implements
double logRateGivenDestCorrected = MathsUtils.digamma(countOfDestNextMatched) // - (1.0 / (double) countOfDestNextMatched) // I don't think this correction is required
- Math.log(timeInWindowWithMatchingDestHistory);
if(USE_POINT_ITSELF) {
logRateGivenSourceAndDestCorrected = MathsUtils.digamma(Knns + 1) - Math.log(timeInWindowWithMatchingJointHistories);
logRateGivenDestCorrected = MathsUtils.digamma(countOfDestNextMatched) - Math.log(timeInWindowWithMatchingDestHistory);
logRateGivenSourceAndDestCorrected = MathsUtils.digamma(Knns) - Math.log(timeInWindowWithMatchingJointHistories);
logRateGivenDestCorrected = MathsUtils.digamma(countOfDestNextMatched - 1) - Math.log(timeInWindowWithMatchingDestHistory);
}
//============================