mirror of https://github.com/jlizier/jidt
Updating python environment scripts, and adding one to start jupyter in the environment
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@ -24,29 +24,60 @@ folder=jpype_env
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pythonCmd=python3
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pipCmd=pip3
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# Create a python environment (stored in folder ) with jpype1 installed
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# First make sure that the virtualenv package is installed.
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$pipCmd show virtualenv > /dev/null 2>&1
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if [ $? -eq 0 ]; then
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echo "virtualenv already installed, proceeding"
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else
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echo "installing virtualenv with $pipCmd ...".
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# On ubuntu, one could also install via the main package manager, e.g. sudo apt-get install python3-venv (I think this takes care of the followng anyway, but am unsure)
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$pythonCmd -m pip install --user virtualenv
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if [ $? -ne 0 ]; then
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echo "pip install of virtualenv failed"
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exit 1
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else
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echo "pip install of virtualenv succeeded"
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fi
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fi
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# Create a python environment (stored in folder $folder)
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$pythonCmd -m venv $folder
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if [ $? -ne 0 ]; then
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# Virtual environment creation did not work:
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echo "Virtual environment creation did not work." >&2
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echo "If you are on ubuntu you should now run: sudo apt-get install python3-venv" >&2
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echo "Then run this script again" >&2
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exit 2
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else
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echo "Virtual environment created in $folder"
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fi
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# enter the environment
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source $folder/bin/activate
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if [ $? -ne 0 ]; then
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echo "Virtual environment unable to be activated" >&2
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exit 3
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else
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echo "Python environment started and activated."
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echo "Beginning pip installations for the environment"
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fi
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echo "Python environment started and activated"
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# install jpype1, numpy and scipy (does not matter if they are already installed)
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# install jpype1 and numpy (does not matter if they are already installed)
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$pipCmd install jpype1
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$pipCmd install numpy
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echo
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echo "Jpype1 and numpy installed - you have a functional installation."
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echo
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echo "Now trying scipy matplotlib, but they are optional..."
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echo "Now trying scipy, matplotlib and jupyter, but they are optional..."
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echo
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$pipCmd install scipy
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$pipCmd install matplotlib
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$pipCmd install jupyter
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echo
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echo "Scipy matplotlib installed"
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echo "Scipy, matplotlib and jupyter installed"
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echo
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deactivate
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@ -17,13 +17,19 @@
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## along with this program. If not, see <http://www.gnu.org/licenses/>.
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##
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# Start the python environment (stored in folder $folder) with jpype1, numpy and scipy installed
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# Start the python environment (stored in folder $folder) with jpype1, numpy and others installed
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# Name of folder to use and python commands
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folder=jpype_env
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# enter the environment
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source $folder/bin/activate
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if [ $? -ne 0 ]; then
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echo "Virtual environment unable to be activated" >&2
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return 3 # Need return instead of exit since we're running via source
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else
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echo "Python environment from $folder started and activated."
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fi
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echo
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echo "Make sure you called this script as: source start_env.sh"
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@ -0,0 +1,29 @@
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#!/bin/bash
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##
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## Java Information Dynamics Toolkit (JIDT)
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## Copyright (C) 2022, Joseph T. Lizier
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##
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## This program is free software: you can redistribute it and/or modify
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## it under the terms of the GNU General Public License as published by
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## the Free Software Foundation, either version 3 of the License, or
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## (at your option) any later version.
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##
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## This program is distributed in the hope that it will be useful,
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## but WITHOUT ANY WARRANTY; without even the implied warranty of
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## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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## GNU General Public License for more details.
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##
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## You should have received a copy of the GNU General Public License
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## along with this program. If not, see <http://www.gnu.org/licenses/>.
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##
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# Start the python environment (stored in folder $folder) with jpype1, numpy and others installed
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# and then launch jupyter
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source start_env.sh
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echo "Started virtual environment, now starting jupyter ..."
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cd ../..
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jupyter notebook
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